BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037G06SP1|AL430435
(879 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1750 1740 0.0
>3x_Contig1750
Length = 14427
Score = 1740 bits (877), Expect = 0.0
Identities = 878/879 (99%)
Strand = Plus / Minus
Query: 1 gatcttctcgttataatagtattcataatattttccactgaatgcctatcagtcttgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3855 gatcttctcgttataatagtattcataatattttccactgaatgcctatcagtcttgaaa 3796
Query: 61 aatgctacgttgtcccacatcggagggtcataggaagttttaatattcctacaaagcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3795 aatgctacgttgtcccacatcggagggtcataggaagttttaatattcctacaaagcagt 3736
Query: 121 ttctctcaaatgaactctctggaataagagcaatttttaacgcactcaattccattttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3735 ttctctcaaatgaactctctggaataagagcaatttttaacgcactcaattccattttcc 3676
Query: 181 aaatgacgaagccattgacttacatctcttgcgatagacatcggtattagatcatgtgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3675 aaatgacgaagccattgacttacatctcttgcgatagacatcggtattagatcatgtgtg 3616
Query: 241 tccaattgaagggtgacagamactttctcggagttccaaaacatattattttggacagga 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3615 tccaattgaagggtgacagaaactttctcggagttccaaaacatattattttggacagga 3556
Query: 301 tactgagtagtgttattgaaaatcttttacttgttttgttctgtgtggcatataattcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3555 tactgagtagtgttattgaaaatcttttacttgttttgttctgtgtggcatataattcag 3496
Query: 361 tgtaggacagtgatcgttatgccgtcaaattcagatgggaacattggatgaagaaacctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3495 tgtaggacagtgatcgttatgccgtcaaattcagatgggaacattggatgaagaaacctt 3436
Query: 421 ctacttatatactttttggattggtttgttaatcatcggactttgtagctttgatctcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3435 ctacttatatactttttggattggtttgttaatcatcggactttgtagctttgatctcag 3376
Query: 481 ttcgtattattctcaccttcatattagtaatggttcagtaaaatggctccttagaaatgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3375 ttcgtattattctcaccttcatattagtaatggttcagtaaaatggctccttagaaatgg 3316
Query: 541 ctcctacaattctaaggaataatacatacttatatctgttccaagaaaagtactgccgag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3315 ctcctacaattctaaggaataatacatacttatatctgttccaagaaaagtactgccgag 3256
Query: 601 acttttcgtctagcacttctttttaggacttcttactctatagccttttcatgatctttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3255 acttttcgtctagcacttctttttaggacttcttactctatagccttttcatgatctttt 3196
Query: 661 tgtcatgtatttctcaaatgggcgagaagcgaacaatatttgagatggaaaattgaaaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3195 tgtcatgtatttctcaaatgggcgagaagcgaacaatatttgagatggaaaattgaaaaa 3136
Query: 721 ggaagataggggagagggaataggttgggagaaaatgtagaggcagatatatgtatttgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3135 ggaagataggggagagggaataggttgggagaaaatgtagaggcagatatatgtatttgt 3076
Query: 781 tgttgaactggatactgaatagtactgagtggtattggagctaggggttattccagagtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3075 tgttgaactggatactgaatagtactgagtggtattggagctaggggttattccagagtt 3016
Query: 841 agtagaattaacattgatgttgggctatcgactcagtgt 879
|||||||||||||||||||||||||||||||||||||||
Sbjct: 3015 agtagaattaacattgatgttgggctatcgactcagtgt 2977
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6934
Number of Sequences: 1807
Number of extensions: 6934
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 879
length of database: 10,358,551
effective HSP length: 16
effective length of query: 863
effective length of database: 10,329,639
effective search space: 8914478457
effective search space used: 8914478457
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)